Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm24422-201ENSMUST00000157800 119 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm22702-201ENSMUST00000175372 69 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm29470-201ENSMUST00000188007 696 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm21301-201ENSMUST00000189476 699 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm5723-201ENSMUST00000203096 432 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm44112-201ENSMUST00000204787 372 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 A1cf-203ENSMUST00000224400 1204 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 AC125019.1-201ENSMUST00000224809 908 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm5319-201ENSMUST00000118965 873 ntBASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm25722-201ENSMUST00000157498 279 ntBASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm44823-201ENSMUST00000204775 1107 ntBASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm20136-201ENSMUST00000207501 891 ntBASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm18907-201ENSMUST00000209719 932 ntBASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm7986-201ENSMUST00000221336 551 ntBASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Atg4aQ8C9S8 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm13416-201ENSMUST00000117264 1612 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm16418-201ENSMUST00000118577 171 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm9167-201ENSMUST00000182469 962 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm42883-201ENSMUST00000202594 222 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm45509-201ENSMUST00000209624 1229 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms