Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm24840-201ENSMUST00000122603 147 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm1989-201ENSMUST00000126244 636 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm22254-201ENSMUST00000179186 110 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Vis1-201ENSMUST00000183957 201 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm7560-201ENSMUST00000187748 873 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm43396-201ENSMUST00000197506 706 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm43471-201ENSMUST00000197550 467 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 AC161456.1-201ENSMUST00000206771 887 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm17997-201ENSMUST00000211801 840 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 AC192333.2-201ENSMUST00000224771 196 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trim47Q8C0E3 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm23378-201ENSMUST00000082942 107 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Trim47Q8C0E3 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Trim47Q8C0E3 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm37429-201ENSMUST00000193807 1799 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim47Q8C0E3 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trim47Q8C0E3 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm42536-201ENSMUST00000197562 1613 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Trim47Q8C0E3 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Mir688-201ENSMUST00000102055 75 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm23706-201ENSMUST00000104369 82 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm11922-201ENSMUST00000118967 475 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm16260-201ENSMUST00000155141 304 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm24576-201ENSMUST00000175508 248 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm17867-201ENSMUST00000188981 391 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm18426-201ENSMUST00000191874 973 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm38226-201ENSMUST00000192207 521 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm38019-201ENSMUST00000195133 380 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm43472-201ENSMUST00000200175 154 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC8.81□□□□□ -1
Trim47Q8C0E3 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 AC115047.1-201ENSMUST00000213795 322 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm18631-201ENSMUST00000223125 1043 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 AC131710.2-201ENSMUST00000226773 683 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 CT009515.1-201ENSMUST00000228127 586 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim47Q8C0E3 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim47Q8C0E3 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim47Q8C0E3 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.81□□□□□ -1
Trim47Q8C0E3 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim47Q8C0E3 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim47Q8C0E3 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms