Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm26417-201ENSMUST00000104274 135 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Serpina3h-202ENSMUST00000116393 1226 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm12635-201ENSMUST00000117285 752 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm9439-201ENSMUST00000119554 973 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm15096-201ENSMUST00000121918 878 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm10157-201ENSMUST00000139408 343 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Mir1930-201ENSMUST00000158799 84 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm4308-201ENSMUST00000179735 914 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm30517-201ENSMUST00000197350 772 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm19175-201ENSMUST00000199895 916 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm8168-201ENSMUST00000209631 948 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trub1Q8C0D0 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm18908-201ENSMUST00000207125 1483 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm15105-201ENSMUST00000117777 204 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm25180-201ENSMUST00000157746 115 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm5723-201ENSMUST00000203096 432 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm5305-201ENSMUST00000204010 746 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 A1cf-203ENSMUST00000224400 1204 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm23734-201ENSMUST00000083753 109 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 AC107452.3-201ENSMUST00000228807 1308 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm43339-201ENSMUST00000200032 1606 ntBASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trub1Q8C0D0 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms