Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm27030-201ENSMUST00000182551 464 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Gm35323-201ENSMUST00000191836 499 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Gm37135-201ENSMUST00000192652 534 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Gm42443-201ENSMUST00000198084 1155 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Gm46203-201ENSMUST00000218130 478 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 AC154219.1-201ENSMUST00000220764 1262 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 CT009556.1-201ENSMUST00000227282 449 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 AC132833.4-201ENSMUST00000228313 203 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Gm24621-201ENSMUST00000082679 140 ntBASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col16a1Q8BLX7 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm13352-201ENSMUST00000117515 262 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm14733-201ENSMUST00000117680 133 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm13772-201ENSMUST00000118431 317 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm9005-201ENSMUST00000119908 607 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm6977-201ENSMUST00000121568 512 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm12438-201ENSMUST00000122034 336 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm17048-201ENSMUST00000179266 847 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm9274-201ENSMUST00000182505 984 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Mir7235-201ENSMUST00000183796 56 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm18009-201ENSMUST00000203239 1016 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm44861-201ENSMUST00000208325 1220 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm38244-201ENSMUST00000191737 2586 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm43410-201ENSMUST00000197510 2234 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Gm10744-201ENSMUST00000220184 2706 ntBASIC9.17□□□□□ -0.94
Col16a1Q8BLX7 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm13835-201ENSMUST00000118459 685 ntBASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm20223-201ENSMUST00000199932 805 ntBASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm10773-201ENSMUST00000218071 3935 ntBASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm37321-201ENSMUST00000195742 1872 ntBASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm18716-201ENSMUST00000204507 1603 ntBASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms