Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Gm8177-201ENSMUST00000181591 1336 ntBASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Nup98Q6PFD9 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm22267-201ENSMUST00000104008 131 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm8312-201ENSMUST00000119380 618 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm43033-201ENSMUST00000199682 425 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm44705-201ENSMUST00000206719 339 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 AC153143.2-201ENSMUST00000220999 1804 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm18620-201ENSMUST00000222295 324 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 n-R5s178-201ENSMUST00000104249 114 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm7270-201ENSMUST00000195818 1128 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 CT025579.4-201ENSMUST00000224598 627 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup98Q6PFD9 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Gm4927-201ENSMUST00000219548 1318 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Gm12140-201ENSMUST00000121214 544 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Gm26353-201ENSMUST00000158224 255 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Gm7463-201ENSMUST00000201541 547 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Gm5119-201ENSMUST00000215858 634 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms