Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm20236-201ENSMUST00000193037 4540 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm37094-201ENSMUST00000193352 4540 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Rnu11-201ENSMUST00000104135 134 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm24065-201ENSMUST00000157487 264 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm26162-201ENSMUST00000157793 132 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm44809-201ENSMUST00000208305 993 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 AC112680.2-201ENSMUST00000213119 595 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 AC122290.1-201ENSMUST00000225631 1078 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 CT009556.1-201ENSMUST00000227282 449 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm8526-201ENSMUST00000079153 475 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Nedd4l-204ENSMUST00000224347 3150 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm44745-201ENSMUST00000206563 2723 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Mir1960-201ENSMUST00000157488 78 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Mir3097-201ENSMUST00000175356 67 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm8604-201ENSMUST00000183150 965 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm8581-201ENSMUST00000188636 890 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm38237-201ENSMUST00000193366 376 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm43576-201ENSMUST00000197937 871 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Igkv4-73-201ENSMUST00000199760 358 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm5324-201ENSMUST00000208115 476 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm9269-201ENSMUST00000221661 578 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm26163-201ENSMUST00000083792 178 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Shank3Q4ACU6 Gm7967-202ENSMUST00000191042 5042 ntBASIC8.66□□□□□ -1.02
Shank3Q4ACU6 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 AC116476.1-201ENSMUST00000226274 2318 ntBASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.65□□□□□ -1.02
Shank3Q4ACU6 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Shank3Q4ACU6 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Shank3Q4ACU6 Gm13462-201ENSMUST00000121472 961 ntBASIC8.65□□□□□ -1.03
Shank3Q4ACU6 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Shank3Q4ACU6 Gm22210-201ENSMUST00000158101 144 ntBASIC8.65□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms