Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.75□□□□□ -1.17
Tpm1P58771 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC7.75□□□□□ -1.17
Tpm1P58771 Gm23701-201ENSMUST00000103893 110 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Gm13400-201ENSMUST00000117436 380 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.75□□□□□ -1.17
Tpm1P58771 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Tpm1P58771 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.75□□□□□ -1.17
Tpm1P58771 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Gm29355-201ENSMUST00000188178 697 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Gm28953-201ENSMUST00000188336 697 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Gm28239-201ENSMUST00000190225 447 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Gm20788-201ENSMUST00000190538 697 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Gm37395-201ENSMUST00000194721 697 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC7.75□□□□□ -1.17
Tpm1P58771 Gm43558-201ENSMUST00000200155 210 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.75□□□□□ -1.17
Tpm1P58771 Gm34424-201ENSMUST00000213400 782 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC7.75□□□□□ -1.17
Tpm1P58771 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Tpm1P58771 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
Tpm1P58771 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Tpm1P58771 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Tpm1P58771 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.75□□□□□ -1.17
Tpm1P58771 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Tpm1P58771 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Tpm1P58771 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm12445-201ENSMUST00000117947 885 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Gm6067-201ENSMUST00000121648 491 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Gm14830-201ENSMUST00000121899 700 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC7.74□□□□□ -1.17
Tpm1P58771 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC7.74□□□□□ -1.17
Tpm1P58771 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.74□□□□□ -1.17
Tpm1P58771 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
Tpm1P58771 Mir1962-201ENSMUST00000157516 121 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Gm5839-201ENSMUST00000182835 1007 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm21054-201ENSMUST00000203981 380 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm18243-201ENSMUST00000220756 887 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 AC137950.1-201ENSMUST00000228553 515 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Tpm1P58771 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm26130-201ENSMUST00000083171 138 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Gm24613-201ENSMUST00000083266 130 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.74□□□□□ -1.17
Tpm1P58771 Gm38195-201ENSMUST00000194247 1499 ntBASIC7.74□□□□□ -1.17
Tpm1P58771 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Tpm1P58771 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Tpm1P58771 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Tpm1P58771 Robo2-210ENSMUST00000226478 8059 ntBASIC7.73□□□□□ -1.17
Tpm1P58771 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.73□□□□□ -1.17
Tpm1P58771 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Tpm1P58771 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms