Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm8582-201ENSMUST00000164061 789 ntBASIC7.64□□□□□ -1.19
NcanP55066 Gm5611-201ENSMUST00000164523 852 ntBASIC7.64□□□□□ -1.19
NcanP55066 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.64□□□□□ -1.19
NcanP55066 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
NcanP55066 Gm24824-201ENSMUST00000175097 78 ntBASIC7.64□□□□□ -1.19
NcanP55066 Gm17048-201ENSMUST00000179266 847 ntBASIC7.64□□□□□ -1.19
NcanP55066 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.64□□□□□ -1.19
NcanP55066 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
NcanP55066 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC7.64□□□□□ -1.19
NcanP55066 Gm17895-201ENSMUST00000194028 874 ntBASIC7.64□□□□□ -1.19
NcanP55066 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.64□□□□□ -1.19
NcanP55066 Gm8190-201ENSMUST00000199603 586 ntBASIC7.64□□□□□ -1.19
NcanP55066 Gm7492-201ENSMUST00000201745 725 ntBASIC7.64□□□□□ -1.19
NcanP55066 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
NcanP55066 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
NcanP55066 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
NcanP55066 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.64□□□□□ -1.19
NcanP55066 Gm19786-201ENSMUST00000222589 580 ntBASIC7.64□□□□□ -1.19
NcanP55066 Gm36758-201ENSMUST00000222594 310 ntBASIC7.64□□□□□ -1.19
NcanP55066 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.64□□□□□ -1.19
NcanP55066 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.64□□□□□ -1.19
NcanP55066 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
NcanP55066 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
NcanP55066 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NcanP55066 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
NcanP55066 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
NcanP55066 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NcanP55066 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NcanP55066 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NcanP55066 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
NcanP55066 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NcanP55066 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NcanP55066 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
NcanP55066 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
NcanP55066 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
NcanP55066 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NcanP55066 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NcanP55066 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC7.63□□□□□ -1.19
NcanP55066 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.63□□□□□ -1.19
NcanP55066 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.63□□□□□ -1.19
NcanP55066 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Gm37326-201ENSMUST00000192828 3071 ntBASIC7.63□□□□□ -1.19
NcanP55066 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
NcanP55066 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.63□□□□□ -1.19
NcanP55066 Gm26289-201ENSMUST00000104169 131 ntBASIC7.63□□□□□ -1.19
NcanP55066 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.63□□□□□ -1.19
NcanP55066 Gm14865-201ENSMUST00000117523 494 ntBASIC7.63□□□□□ -1.19
NcanP55066 Gm11533-201ENSMUST00000120287 477 ntBASIC7.63□□□□□ -1.19
NcanP55066 Gm11585-201ENSMUST00000120901 569 ntBASIC7.63□□□□□ -1.19
NcanP55066 Gm15750-201ENSMUST00000120970 616 ntBASIC7.63□□□□□ -1.19
NcanP55066 Gm15300-201ENSMUST00000122324 279 ntBASIC7.63□□□□□ -1.19
NcanP55066 Gm15242-201ENSMUST00000122459 283 ntBASIC7.63□□□□□ -1.19
NcanP55066 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC7.63□□□□□ -1.19
NcanP55066 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.63□□□□□ -1.19
NcanP55066 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC7.63□□□□□ -1.19
NcanP55066 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.63□□□□□ -1.19
NcanP55066 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Mir6906-201ENSMUST00000198998 58 ntBASIC7.63□□□□□ -1.19
NcanP55066 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.63□□□□□ -1.19
NcanP55066 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.63□□□□□ -1.19
NcanP55066 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.63□□□□□ -1.19
NcanP55066 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.63□□□□□ -1.19
NcanP55066 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC7.63□□□□□ -1.19
NcanP55066 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.63□□□□□ -1.19
NcanP55066 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
NcanP55066 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
NcanP55066 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
NcanP55066 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
NcanP55066 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
NcanP55066 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC7.63□□□□□ -1.19
NcanP55066 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NcanP55066 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC7.63□□□□□ -1.19
NcanP55066 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
NcanP55066 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
NcanP55066 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.62□□□□□ -1.19
NcanP55066 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.62□□□□□ -1.19
NcanP55066 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms