Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Gm4451-201ENSMUST00000186000 1891 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Gm42615-201ENSMUST00000197704 1820 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Rfx1P48377 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Gm37370-201ENSMUST00000191996 1410 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm37289-201ENSMUST00000195409 1402 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Rfx1P48377 Mup-ps14-201ENSMUST00000118437 532 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm12875-201ENSMUST00000118745 344 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm13552-201ENSMUST00000118837 417 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm14788-201ENSMUST00000119457 375 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Mup-ps10-201ENSMUST00000119626 556 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm14417-201ENSMUST00000120036 1074 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm16523-201ENSMUST00000121253 592 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm12327-201ENSMUST00000121729 1168 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm6182-201ENSMUST00000156439 1208 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm26357-201ENSMUST00000158218 115 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm25839-201ENSMUST00000158921 103 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm5205-201ENSMUST00000182253 1003 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm27039-201ENSMUST00000182438 962 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm27156-201ENSMUST00000184589 754 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC8.91□□□□□ -0.98
Rfx1P48377 Gm44833-201ENSMUST00000208368 331 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC8.91□□□□□ -0.98
Rfx1P48377 AC168880.1-201ENSMUST00000225113 707 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 AC122356.2-201ENSMUST00000226962 820 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 AC142114.1-201ENSMUST00000227724 328 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Gm10029-201ENSMUST00000089635 330 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Rfx1P48377 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Gm42676-201ENSMUST00000197609 2686 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.91□□□□□ -0.98
Rfx1P48377 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rfx1P48377 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rfx1P48377 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rfx1P48377 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.9□□□□□ -0.98
Rfx1P48377 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rfx1P48377 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rfx1P48377 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rfx1P48377 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC8.9□□□□□ -0.98
Rfx1P48377 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rfx1P48377 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rfx1P48377 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.9□□□□□ -0.98
Rfx1P48377 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Rfx1P48377 Gm6819-201ENSMUST00000185325 1891 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rfx1P48377 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rfx1P48377 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rfx1P48377 Gm13573-201ENSMUST00000116410 631 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Gm6292-201ENSMUST00000120712 1095 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Gm15780-201ENSMUST00000121283 935 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Mir1968-201ENSMUST00000157429 68 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC8.9□□□□□ -0.98
Rfx1P48377 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC8.9□□□□□ -0.98
Rfx1P48377 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC8.9□□□□□ -0.98
Rfx1P48377 Gm8004-201ENSMUST00000187782 617 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC8.9□□□□□ -0.98
Rfx1P48377 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC8.9□□□□□ -0.98
Rfx1P48377 Gm38078-201ENSMUST00000192771 392 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Gm38063-201ENSMUST00000193990 342 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms