Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm25546-201ENSMUST00000103977 132 ntBASIC6.26□□□□□ -1.41
P20040 Gm22438-201ENSMUST00000104049 132 ntBASIC6.26□□□□□ -1.41
P20040 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.26□□□□□ -1.41
P20040 Gm11880-201ENSMUST00000117612 399 ntBASIC6.26□□□□□ -1.41
P20040 Gm5752-201ENSMUST00000117771 594 ntBASIC6.26□□□□□ -1.41
P20040 Gm11865-201ENSMUST00000118093 859 ntBASIC6.26□□□□□ -1.41
P20040 Gm13463-201ENSMUST00000119020 233 ntBASIC6.26□□□□□ -1.41
P20040 Gm13525-201ENSMUST00000120607 478 ntBASIC6.26□□□□□ -1.41
P20040 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.26□□□□□ -1.41
P20040 Mir1981-201ENSMUST00000157934 82 ntBASIC6.26□□□□□ -1.41
P20040 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
P20040 Gm3611-201ENSMUST00000173687 877 ntBASIC6.26□□□□□ -1.41
P20040 Gm26959-201ENSMUST00000182376 978 ntBASIC6.26□□□□□ -1.41
P20040 Gm27373-201ENSMUST00000184017 184 ntBASIC6.26□□□□□ -1.41
P20040 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.26□□□□□ -1.41
P20040 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.26□□□□□ -1.41
P20040 Gm18752-201ENSMUST00000192876 608 ntBASIC6.26□□□□□ -1.41
P20040 Gm26413-201ENSMUST00000196783 126 ntBASIC6.26□□□□□ -1.41
P20040 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.26□□□□□ -1.41
P20040 Gm44192-201ENSMUST00000204195 556 ntBASIC6.26□□□□□ -1.41
P20040 Gm38840-201ENSMUST00000204716 843 ntBASIC6.26□□□□□ -1.41
P20040 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.26□□□□□ -1.41
P20040 Gm45198-201ENSMUST00000206796 591 ntBASIC6.26□□□□□ -1.41
P20040 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.26□□□□□ -1.41
P20040 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.26□□□□□ -1.41
P20040 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.26□□□□□ -1.41
P20040 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.26□□□□□ -1.41
P20040 Gm4796-201ENSMUST00000219802 624 ntBASIC6.26□□□□□ -1.41
P20040 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.26□□□□□ -1.41
P20040 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.26□□□□□ -1.41
P20040 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
P20040 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
P20040 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
P20040 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
P20040 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
P20040 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
P20040 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
P20040 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.26□□□□□ -1.41
P20040 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.26□□□□□ -1.41
P20040 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
P20040 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.26□□□□□ -1.41
P20040 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.26□□□□□ -1.41
P20040 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.26□□□□□ -1.41
P20040 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
P20040 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
P20040 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
P20040 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
P20040 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
P20040 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.25□□□□□ -1.41
P20040 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
P20040 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
P20040 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
P20040 Gm14201-201ENSMUST00000117627 289 ntBASIC6.25□□□□□ -1.41
P20040 Gm14158-201ENSMUST00000118409 308 ntBASIC6.25□□□□□ -1.41
P20040 Gm15778-201ENSMUST00000118469 608 ntBASIC6.25□□□□□ -1.41
P20040 Gm12331-201ENSMUST00000119927 622 ntBASIC6.25□□□□□ -1.41
P20040 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC6.25□□□□□ -1.41
P20040 Gm14796-201ENSMUST00000121216 959 ntBASIC6.25□□□□□ -1.41
P20040 Gm12181-201ENSMUST00000121448 531 ntBASIC6.25□□□□□ -1.41
P20040 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.25□□□□□ -1.41
P20040 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.25□□□□□ -1.41
P20040 Gm24011-201ENSMUST00000157732 268 ntBASIC6.25□□□□□ -1.41
P20040 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.25□□□□□ -1.41
P20040 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.25□□□□□ -1.41
P20040 Gm5154-201ENSMUST00000203971 399 ntBASIC6.25□□□□□ -1.41
P20040 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.25□□□□□ -1.41
P20040 Gm44760-201ENSMUST00000206375 1173 ntBASIC6.25□□□□□ -1.41
P20040 Gm45478-201ENSMUST00000209472 211 ntBASIC6.25□□□□□ -1.41
P20040 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.25□□□□□ -1.41
P20040 Gm5080-201ENSMUST00000220341 743 ntBASIC6.25□□□□□ -1.41
P20040 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.25□□□□□ -1.41
P20040 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.25□□□□□ -1.41
P20040 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
P20040 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.25□□□□□ -1.41
P20040 Gm22053-201ENSMUST00000083394 200 ntBASIC6.25□□□□□ -1.41
P20040 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.25□□□□□ -1.41
P20040 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
P20040 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
P20040 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.25□□□□□ -1.41
P20040 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.25□□□□□ -1.41
P20040 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms