Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Gm11907-201ENSMUST00000118918 1007 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm11245-201ENSMUST00000119419 1037 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm14465-201ENSMUST00000120603 567 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm16407-201ENSMUST00000122134 567 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm8577-201ENSMUST00000122420 986 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7□□□□□ -1.29
Lire1P11260 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC7□□□□□ -1.29
Lire1P11260 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Gm7502-201ENSMUST00000169235 733 ntBASIC7□□□□□ -1.29
Lire1P11260 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Gm9556-201ENSMUST00000182938 940 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm8167-201ENSMUST00000183320 958 ntBASIC7□□□□□ -1.29
Lire1P11260 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Gm29144-201ENSMUST00000189235 339 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm29238-201ENSMUST00000189709 695 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm28607-201ENSMUST00000190142 339 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm28121-201ENSMUST00000191420 339 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm20940-201ENSMUST00000197308 360 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm43553-201ENSMUST00000200900 685 ntBASIC7□□□□□ -1.29
Lire1P11260 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC7□□□□□ -1.29
Lire1P11260 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC7□□□□□ -1.29
Lire1P11260 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC7□□□□□ -1.29
Lire1P11260 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC7□□□□□ -1.29
Lire1P11260 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC7□□□□□ -1.29
Lire1P11260 AC118249.1-201ENSMUST00000224822 608 ntBASIC7□□□□□ -1.29
Lire1P11260 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7□□□□□ -1.29
Lire1P11260 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC7□□□□□ -1.29
Lire1P11260 Gm25259-201ENSMUST00000083048 193 ntBASIC7□□□□□ -1.29
Lire1P11260 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7□□□□□ -1.29
Lire1P11260 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7□□□□□ -1.29
Lire1P11260 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7□□□□□ -1.29
Lire1P11260 BC055308-201ENSMUST00000193380 2538 ntBASIC7□□□□□ -1.29
Lire1P11260 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
Lire1P11260 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Gm37968-201ENSMUST00000195131 3201 ntBASIC7□□□□□ -1.29
Lire1P11260 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm28720-201ENSMUST00000190728 3156 ntBASIC7□□□□□ -1.29
Lire1P11260 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Lire1P11260 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Lire1P11260 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Lire1P11260 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Lire1P11260 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Gm22426-201ENSMUST00000103811 96 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Gm22152-201ENSMUST00000116966 125 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Gm11796-201ENSMUST00000120208 972 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Gm15160-201ENSMUST00000120553 907 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Gm16330-201ENSMUST00000128324 297 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC6.99□□□□□ -1.29
Lire1P11260 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC6.99□□□□□ -1.29
Lire1P11260 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC6.99□□□□□ -1.29
Lire1P11260 Gm29496-201ENSMUST00000189854 693 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Gm37355-201ENSMUST00000193345 606 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.99□□□□□ -1.29
Lire1P11260 AC165349.2-201ENSMUST00000219097 426 ntBASIC6.99□□□□□ -1.29
Lire1P11260 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.99□□□□□ -1.29
Lire1P11260 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.99□□□□□ -1.29
Lire1P11260 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.99□□□□□ -1.29
Lire1P11260 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Lire1P11260 Gm20302-201ENSMUST00000080671 275 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
Lire1P11260 Mir146b-201ENSMUST00000093619 109 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Lire1P11260 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.99□□□□□ -1.29
Lire1P11260 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.99□□□□□ -1.29
Lire1P11260 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.99□□□□□ -1.29
Lire1P11260 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Lire1P11260 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Lire1P11260 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.98□□□□□ -1.29
Lire1P11260 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms