Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm15765-201ENSMUST00000118407 910 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm13224-201ENSMUST00000119586 94 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm13642-201ENSMUST00000121697 381 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC8.26□□□□□ -1.09
Col1a1P11087 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm5694-201ENSMUST00000195648 641 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm8637-201ENSMUST00000212919 1085 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC8.26□□□□□ -1.09
Col1a1P11087 AC125064.1-201ENSMUST00000225801 295 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 AC158750.1-201ENSMUST00000226163 634 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm6436-201ENSMUST00000077163 451 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm24621-201ENSMUST00000082679 140 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Col1a1P11087 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.26□□□□□ -1.09
Col1a1P11087 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col1a1P11087 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Col1a1P11087 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.26□□□□□ -1.09
Col1a1P11087 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Col1a1P11087 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Col1a1P11087 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm12242-201ENSMUST00000118824 738 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm15181-201ENSMUST00000120142 177 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm25574-201ENSMUST00000175245 249 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm27653-201ENSMUST00000185037 136 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm19035-202ENSMUST00000194575 959 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm19185-201ENSMUST00000196365 643 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm2040-201ENSMUST00000202979 289 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC8.26□□□□□ -1.09
Col1a1P11087 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Col1a1P11087 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Col1a1P11087 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Col1a1P11087 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Col1a1P11087 Gm37706-201ENSMUST00000195379 2765 ntBASIC8.25□□□□□ -1.09
Col1a1P11087 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Col1a1P11087 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Gm12135-201ENSMUST00000119170 466 ntBASIC8.25□□□□□ -1.09
Col1a1P11087 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Gm17137-202ENSMUST00000165729 957 ntBASIC8.25□□□□□ -1.09
Col1a1P11087 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Gm6726-201ENSMUST00000172786 681 ntBASIC8.25□□□□□ -1.09
Col1a1P11087 Gm23450-201ENSMUST00000178285 91 ntBASIC8.25□□□□□ -1.09
Col1a1P11087 Gm21301-201ENSMUST00000189476 699 ntBASIC8.25□□□□□ -1.09
Col1a1P11087 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC8.25□□□□□ -1.09
Col1a1P11087 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.25□□□□□ -1.09
Col1a1P11087 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col1a1P11087 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.25□□□□□ -1.09
Col1a1P11087 Gm38043-201ENSMUST00000195501 5141 ntBASIC8.24□□□□□ -1.09
Col1a1P11087 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Col1a1P11087 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col1a1P11087 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col1a1P11087 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms