Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mir7084-201ENSMUST00000183876 70 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Mir378d-201ENSMUST00000184232 110 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm7512-201ENSMUST00000195217 1170 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm8539-201ENSMUST00000199822 501 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm44722-201ENSMUST00000206473 436 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm45394-201ENSMUST00000209240 1175 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm15153-201ENSMUST00000119867 274 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm7244-201ENSMUST00000164658 455 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm5272-201ENSMUST00000182730 982 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm29369-201ENSMUST00000190674 615 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 AC122539.1-201ENSMUST00000219925 329 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 AC157212.1-201ENSMUST00000228398 1075 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Mir455-201ENSMUST00000093594 82 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.66□□□□□ -1.18
Chmp6P0C0A3 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.66□□□□□ -1.18
Chmp6P0C0A3 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm15105-201ENSMUST00000117777 204 ntBASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm11257-201ENSMUST00000121313 315 ntBASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm24442-201ENSMUST00000157238 327 ntBASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm24057-201ENSMUST00000158616 302 ntBASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm7426-201ENSMUST00000179046 404 ntBASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm23139-201ENSMUST00000179454 132 ntBASIC7.65□□□□□ -1.18
Chmp6P0C0A3 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm17786-201ENSMUST00000182000 427 ntBASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Mir8094-201ENSMUST00000183361 117 ntBASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm8524-201ENSMUST00000186232 379 ntBASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Chmp6P0C0A3 Gm28952-201ENSMUST00000189285 681 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms