Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.33□□□□□ -1.4
P06344 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.33□□□□□ -1.4
P06344 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P06344 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P06344 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P06344 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P06344 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.33□□□□□ -1.4
P06344 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P06344 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
P06344 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
P06344 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
P06344 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
P06344 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.32□□□□□ -1.4
P06344 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
P06344 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.32□□□□□ -1.4
P06344 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
P06344 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
P06344 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.32□□□□□ -1.4
P06344 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
P06344 Gm25379-201ENSMUST00000104338 114 ntBASIC6.32□□□□□ -1.4
P06344 Gm22671-201ENSMUST00000104420 134 ntBASIC6.32□□□□□ -1.4
P06344 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
P06344 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.32□□□□□ -1.4
P06344 Gm15203-201ENSMUST00000117668 455 ntBASIC6.32□□□□□ -1.4
P06344 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.32□□□□□ -1.4
P06344 Gm11903-201ENSMUST00000118958 727 ntBASIC6.32□□□□□ -1.4
P06344 Gm9439-201ENSMUST00000119554 973 ntBASIC6.32□□□□□ -1.4
P06344 Gm12477-201ENSMUST00000121221 571 ntBASIC6.32□□□□□ -1.4
P06344 Gm15096-201ENSMUST00000121918 878 ntBASIC6.32□□□□□ -1.4
P06344 Gm22024-201ENSMUST00000122733 287 ntBASIC6.32□□□□□ -1.4
P06344 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.32□□□□□ -1.4
P06344 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.32□□□□□ -1.4
P06344 Mir1930-201ENSMUST00000158799 84 ntBASIC6.32□□□□□ -1.4
P06344 Gm25640-201ENSMUST00000175378 125 ntBASIC6.32□□□□□ -1.4
P06344 Gm19815-201ENSMUST00000175818 335 ntBASIC6.32□□□□□ -1.4
P06344 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.32□□□□□ -1.4
P06344 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.32□□□□□ -1.4
P06344 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.32□□□□□ -1.4
P06344 Gm37349-201ENSMUST00000194205 624 ntBASIC6.32□□□□□ -1.4
P06344 Gm24826-202ENSMUST00000197298 216 ntBASIC6.32□□□□□ -1.4
P06344 Gm44982-201ENSMUST00000208795 471 ntBASIC6.32□□□□□ -1.4
P06344 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.32□□□□□ -1.4
P06344 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.32□□□□□ -1.4
P06344 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.32□□□□□ -1.4
P06344 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
P06344 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.32□□□□□ -1.4
P06344 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
P06344 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.32□□□□□ -1.4
P06344 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.32□□□□□ -1.4
P06344 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
P06344 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
P06344 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P06344 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
P06344 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.31□□□□□ -1.4
P06344 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.31□□□□□ -1.4
P06344 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.31□□□□□ -1.4
P06344 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
P06344 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
P06344 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
P06344 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
P06344 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.31□□□□□ -1.4
P06344 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
P06344 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC6.31□□□□□ -1.4
P06344 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
P06344 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
P06344 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
P06344 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.31□□□□□ -1.4
P06344 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.31□□□□□ -1.4
P06344 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.31□□□□□ -1.4
P06344 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.31□□□□□ -1.4
P06344 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.31□□□□□ -1.4
P06344 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.31□□□□□ -1.4
P06344 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
P06344 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.31□□□□□ -1.4
P06344 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
P06344 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
P06344 Gm24869-201ENSMUST00000104072 128 ntBASIC6.31□□□□□ -1.4
P06344 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
P06344 Gm13735-201ENSMUST00000120217 670 ntBASIC6.31□□□□□ -1.4
P06344 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms