Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CopeO89079 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.13□□□□□ -1.27
CopeO89079 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CopeO89079 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CopeO89079 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CopeO89079 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.13□□□□□ -1.27
CopeO89079 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CopeO89079 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CopeO89079 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.13□□□□□ -1.27
CopeO89079 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CopeO89079 Mir697-201ENSMUST00000102316 109 ntBASIC7.13□□□□□ -1.27
CopeO89079 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Mir760-201ENSMUST00000103257 119 ntBASIC7.13□□□□□ -1.27
CopeO89079 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CopeO89079 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CopeO89079 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CopeO89079 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.13□□□□□ -1.27
CopeO89079 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.13□□□□□ -1.27
CopeO89079 Gm11558-201ENSMUST00000118454 459 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm14727-201ENSMUST00000118526 525 ntBASIC7.13□□□□□ -1.27
CopeO89079 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm12944-201ENSMUST00000119262 463 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm14721-201ENSMUST00000121381 525 ntBASIC7.13□□□□□ -1.27
CopeO89079 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CopeO89079 Gm17217-201ENSMUST00000166613 469 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.13□□□□□ -1.27
CopeO89079 Gm20797-201ENSMUST00000177894 383 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm27401-201ENSMUST00000184052 173 ntBASIC7.13□□□□□ -1.27
CopeO89079 Mir6357-201ENSMUST00000184246 104 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.13□□□□□ -1.27
CopeO89079 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CopeO89079 Gm8101-201ENSMUST00000192796 478 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm38079-201ENSMUST00000195603 154 ntBASIC7.13□□□□□ -1.27
CopeO89079 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm43926-201ENSMUST00000203978 430 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm44111-201ENSMUST00000204649 399 ntBASIC7.13□□□□□ -1.27
CopeO89079 Gm44971-201ENSMUST00000206192 337 ntBASIC7.13□□□□□ -1.27
CopeO89079 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.13□□□□□ -1.27
CopeO89079 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.13□□□□□ -1.27
CopeO89079 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.13□□□□□ -1.27
CopeO89079 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC7.13□□□□□ -1.27
CopeO89079 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CopeO89079 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CopeO89079 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Gm7731-201ENSMUST00000091759 470 ntBASIC7.13□□□□□ -1.27
CopeO89079 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CopeO89079 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.13□□□□□ -1.27
CopeO89079 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CopeO89079 Gm44093-201ENSMUST00000204381 1802 ntBASIC7.13□□□□□ -1.27
CopeO89079 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CopeO89079 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CopeO89079 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CopeO89079 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CopeO89079 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CopeO89079 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.12□□□□□ -1.27
CopeO89079 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopeO89079 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopeO89079 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.12□□□□□ -1.27
CopeO89079 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopeO89079 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 Gm14550-201ENSMUST00000117918 407 ntBASIC7.12□□□□□ -1.27
CopeO89079 Gm12817-201ENSMUST00000119622 610 ntBASIC7.12□□□□□ -1.27
CopeO89079 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.12□□□□□ -1.27
CopeO89079 Gm5270-201ENSMUST00000121506 1002 ntBASIC7.12□□□□□ -1.27
CopeO89079 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CopeO89079 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
CopeO89079 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.12□□□□□ -1.27
CopeO89079 Gm27373-201ENSMUST00000184017 184 ntBASIC7.12□□□□□ -1.27
CopeO89079 Gm38164-201ENSMUST00000192810 330 ntBASIC7.12□□□□□ -1.27
CopeO89079 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.12□□□□□ -1.27
CopeO89079 Gm26413-202ENSMUST00000198972 127 ntBASIC7.12□□□□□ -1.27
CopeO89079 Gm3511-201ENSMUST00000199823 204 ntBASIC7.12□□□□□ -1.27
CopeO89079 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 Gm7392-201ENSMUST00000217815 345 ntBASIC7.12□□□□□ -1.27
CopeO89079 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.12□□□□□ -1.27
CopeO89079 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.12□□□□□ -1.27
CopeO89079 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.12□□□□□ -1.27
CopeO89079 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopeO89079 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms