Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Gm25013-201ENSMUST00000158402 128 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Gm9332-201ENSMUST00000198431 730 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Gm27760-201ENSMUST00000185048 114 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Gm43105-201ENSMUST00000202987 459 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col6a3E9PWQ3 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm21301-201ENSMUST00000189476 699 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm44943-201ENSMUST00000207254 300 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm2996-201ENSMUST00000211398 537 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm42452-201ENSMUST00000199749 617 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm24303-201ENSMUST00000178237 126 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm28567-201ENSMUST00000190270 693 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm18699-201ENSMUST00000190713 243 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm37044-201ENSMUST00000193531 693 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm38369-201ENSMUST00000195101 693 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm44251-201ENSMUST00000204963 442 ntBASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col6a3E9PWQ3 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Mir1947-201ENSMUST00000158235 85 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm29144-201ENSMUST00000189235 339 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm28607-201ENSMUST00000190142 339 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm28121-201ENSMUST00000191420 339 ntBASIC6.74□□□□□ -1.33
Col6a3E9PWQ3 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms