Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm25546-201ENSMUST00000103977 132 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm22438-201ENSMUST00000104049 132 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm11343-201ENSMUST00000120579 599 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm26413-201ENSMUST00000196783 126 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm45478-201ENSMUST00000209472 211 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim3Q9R1R2 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm23527-201ENSMUST00000104570 130 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm13414-201ENSMUST00000117516 727 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm5752-201ENSMUST00000117771 594 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm11833-201ENSMUST00000118393 853 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm8916-201ENSMUST00000119732 949 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm11945-201ENSMUST00000120551 476 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm17965-201ENSMUST00000193904 517 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm44931-201ENSMUST00000206056 545 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm18562-201ENSMUST00000209949 915 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm45782-201ENSMUST00000212670 366 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm19056-201ENSMUST00000218220 797 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim3Q9R1R2 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms