Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm26419-201ENSMUST00000104272 133 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm14466-201ENSMUST00000119028 451 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm11726-201ENSMUST00000121028 424 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 BC064078-201ENSMUST00000122939 570 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm25969-201ENSMUST00000157166 132 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm24442-201ENSMUST00000157238 327 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm2976-201ENSMUST00000160362 513 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm22702-201ENSMUST00000175372 69 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm27014-201ENSMUST00000182658 937 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Upk3aQ9JKX8 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Upk3aQ9JKX8 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Upk3aQ9JKX8 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.77□□□□□ -1.32
Upk3aQ9JKX8 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.77□□□□□ -1.32
Upk3aQ9JKX8 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm22781-201ENSMUST00000104083 137 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm17184-201ENSMUST00000111864 462 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm13423-201ENSMUST00000117205 888 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm22342-201ENSMUST00000122647 298 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm16248-201ENSMUST00000124238 243 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm23077-201ENSMUST00000157854 116 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm23276-201ENSMUST00000157913 138 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm16113-201ENSMUST00000159629 372 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm3760-201ENSMUST00000167475 804 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm18191-201ENSMUST00000174624 824 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm25640-201ENSMUST00000175378 125 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm4525-201ENSMUST00000198831 254 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm9240-201ENSMUST00000206527 742 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm26130-201ENSMUST00000083171 138 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms