Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm43080-201ENSMUST00000199006 2643 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm44007-201ENSMUST00000203845 2189 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm42536-201ENSMUST00000197562 1613 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm24373-201ENSMUST00000104393 132 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm12636-201ENSMUST00000117395 624 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm15785-201ENSMUST00000119145 694 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm13751-201ENSMUST00000120280 752 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm14989-201ENSMUST00000120497 207 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm12317-201ENSMUST00000122307 319 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm24738-201ENSMUST00000158856 123 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm6838-201ENSMUST00000172851 582 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm20813-201ENSMUST00000186646 705 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm7200-201ENSMUST00000188426 1163 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm21923-201ENSMUST00000188455 696 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm28239-201ENSMUST00000190225 447 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm18131-201ENSMUST00000199241 449 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm4859-201ENSMUST00000199625 787 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm9497-201ENSMUST00000199908 538 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm43227-201ENSMUST00000202239 677 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm19032-201ENSMUST00000208584 592 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm45247-201ENSMUST00000210757 309 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 AC192333.2-201ENSMUST00000224771 196 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 AC126939.4-201ENSMUST00000225360 743 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 AC131033.2-201ENSMUST00000228138 1011 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm6054-201ENSMUST00000078052 378 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm35808-201ENSMUST00000204769 2602 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm37429-201ENSMUST00000193807 1799 ntBASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube3bQ9ES34 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm43211-201ENSMUST00000196901 1899 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm12344-201ENSMUST00000117087 329 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm15040-201ENSMUST00000118561 1241 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm13080-201ENSMUST00000120556 420 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Defa-ps10-201ENSMUST00000121649 171 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm23111-201ENSMUST00000122652 105 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms