Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm23187-201ENSMUST00000175746 86 ntBASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7.99□□□□□ -1.13
Smc1aQ9CU62 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm6382-201ENSMUST00000118873 942 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm13495-201ENSMUST00000121156 537 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm14728-201ENSMUST00000122196 492 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm11188-201ENSMUST00000122382 388 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Mir3078-201ENSMUST00000175231 87 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 AC133598.3-204ENSMUST00000224260 767 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Smc1aQ9CU62 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.97□□□□□ -1.13
Smc1aQ9CU62 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm37460-201ENSMUST00000191796 2249 ntBASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm13229-201ENSMUST00000118238 340 ntBASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm11371-201ENSMUST00000120294 385 ntBASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm11474-201ENSMUST00000120814 277 ntBASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm26784-201ENSMUST00000181666 410 ntBASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms