Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Defa-ps10-201ENSMUST00000121649 171 ntBASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm2709-201ENSMUST00000142979 350 ntBASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm7393-201ENSMUST00000172650 739 ntBASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm5272-201ENSMUST00000182730 982 ntBASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm28413-201ENSMUST00000189369 291 ntBASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm38047-201ENSMUST00000193690 1133 ntBASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm5307-201ENSMUST00000204772 760 ntBASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm6729-201ENSMUST00000165173 1452 ntBASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm45251-201ENSMUST00000209486 1465 ntBASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Krt88Q9CPR6 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm15203-201ENSMUST00000117668 455 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm14893-201ENSMUST00000117904 282 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm13878-201ENSMUST00000117986 577 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm11320-201ENSMUST00000119434 463 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm1947-201ENSMUST00000122451 910 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm8192-201ENSMUST00000182196 958 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm28117-201ENSMUST00000188472 371 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 AC137678.1-201ENSMUST00000198370 118 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm43929-201ENSMUST00000203025 409 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm18207-201ENSMUST00000205486 526 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm6909-201ENSMUST00000209825 989 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm34424-201ENSMUST00000213400 782 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm5791-201ENSMUST00000220840 489 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Olfr888-201ENSMUST00000075228 945 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm6807-201ENSMUST00000077435 888 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Gm7493-201ENSMUST00000085919 626 ntBASIC6.31□□□□□ -1.4
Krt88Q9CPR6 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms