Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Mir6361-201ENSMUST00000185079 101 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 AC138284.3-201ENSMUST00000217345 4663 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm44745-201ENSMUST00000206563 2723 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm16511-201ENSMUST00000120019 564 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm5406-201ENSMUST00000120054 766 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm37463-201ENSMUST00000193819 796 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm17849-201ENSMUST00000219788 853 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Gm18592-201ENSMUST00000221529 276 ntBASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Pcdh15Q99PJ1 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Gm22194-201ENSMUST00000116869 95 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Gm17366-201ENSMUST00000167629 187 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Mir5107-201ENSMUST00000175586 88 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Mir6348-201ENSMUST00000183804 120 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Gm5886-202ENSMUST00000203957 522 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Gm44795-201ENSMUST00000205496 319 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 AC107453.4-201ENSMUST00000227068 1817 ntBASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdh15Q99PJ1 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Peg13-201ENSMUST00000202826 4725 ntBASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC7.86□□□□□ -1.15
Pcdh15Q99PJ1 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms