Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm25276-201ENSMUST00000104300 124 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm11433-201ENSMUST00000118318 228 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm6654-201ENSMUST00000118950 348 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm11928-201ENSMUST00000119323 437 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm11350-201ENSMUST00000121436 870 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm14380-201ENSMUST00000122298 431 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm22262-201ENSMUST00000158713 86 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm8046-201ENSMUST00000172151 616 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm17973-201ENSMUST00000174509 520 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Mir3473c-201ENSMUST00000175262 81 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm37669-201ENSMUST00000192184 820 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm37225-201ENSMUST00000193423 325 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm18445-201ENSMUST00000195502 774 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm43136-201ENSMUST00000200403 636 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm44865-201ENSMUST00000207240 531 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm18645-202ENSMUST00000212222 760 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm18996-201ENSMUST00000214851 755 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Olfr890-201ENSMUST00000079804 945 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm17199-201ENSMUST00000097296 416 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm37520-201ENSMUST00000194883 2672 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
Clrn1Q8K445 Gm38386-201ENSMUST00000194293 3421 ntBASIC6.94□□□□□ -1.3
Clrn1Q8K445 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Rian-209ENSMUST00000182406 3476 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms