Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm10126-201ENSMUST00000221732 168 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm44289-201ENSMUST00000204144 1390 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm25916-201ENSMUST00000104263 131 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm14659-201ENSMUST00000117667 843 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm13900-201ENSMUST00000119402 498 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm11726-201ENSMUST00000121028 424 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm26183-201ENSMUST00000157685 139 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm29214-201ENSMUST00000190216 570 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm29011-201ENSMUST00000191059 712 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm37689-201ENSMUST00000193139 275 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm3511-201ENSMUST00000199823 204 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm44565-201ENSMUST00000208194 269 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 AC164550.1-201ENSMUST00000217821 1066 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm46231-201ENSMUST00000220152 314 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm37902-201ENSMUST00000192839 1683 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Brf1Q8CFK2 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms