Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm11689-201ENSMUST00000120766 302 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm15538-201ENSMUST00000121410 313 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm23740-201ENSMUST00000157385 100 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm20491-201ENSMUST00000173765 1241 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm23139-201ENSMUST00000179454 132 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm43906-201ENSMUST00000203194 906 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 AC154640.3-201ENSMUST00000227492 846 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.08
Nup88Q8CEC0 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm43168-201ENSMUST00000201039 1612 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm22231-201ENSMUST00000101027 73 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm15644-201ENSMUST00000121764 387 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm22795-201ENSMUST00000157233 118 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm26321-201ENSMUST00000157740 242 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm23757-201ENSMUST00000158353 100 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm44192-201ENSMUST00000204195 556 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm17611-202ENSMUST00000220613 814 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Nup88Q8CEC0 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm37863-201ENSMUST00000194911 1457 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm14728-201ENSMUST00000122196 492 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm22024-201ENSMUST00000122733 287 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm27218-201ENSMUST00000183745 392 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms