Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm44231-201ENSMUST00000204106 4075 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm11371-201ENSMUST00000120294 385 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm26357-201ENSMUST00000158218 115 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm22642-201ENSMUST00000175352 252 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm29383-201ENSMUST00000188284 480 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm8920-201ENSMUST00000196153 924 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm44471-201ENSMUST00000197963 100 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm31711-201ENSMUST00000220687 196 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm37863-201ENSMUST00000194911 1457 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps53Q8CCB4 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 AC107452.3-201ENSMUST00000228807 1308 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm22438-201ENSMUST00000104049 132 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm5752-201ENSMUST00000117771 594 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm6428-201ENSMUST00000161062 345 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm7420-201ENSMUST00000162836 842 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm28580-201ENSMUST00000186767 88 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm44760-201ENSMUST00000206375 1173 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm45782-201ENSMUST00000212670 366 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms