Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm16113-201ENSMUST00000159629 372 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm3760-201ENSMUST00000167475 804 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm24756-201ENSMUST00000177002 96 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm28801-201ENSMUST00000188761 449 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm42804-201ENSMUST00000199701 178 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm2774-201ENSMUST00000213650 1165 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 AC165260.6-206ENSMUST00000223884 3698 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm45354-201ENSMUST00000199820 2557 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm23527-201ENSMUST00000104570 130 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm6181-201ENSMUST00000117187 264 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm13930-201ENSMUST00000118569 368 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm11726-201ENSMUST00000121028 424 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm15096-201ENSMUST00000121918 878 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm24442-201ENSMUST00000157238 327 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm17217-201ENSMUST00000166613 469 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm27178-201ENSMUST00000184962 340 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm29357-201ENSMUST00000186877 698 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm2975-201ENSMUST00000209710 820 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm38430-201ENSMUST00000209888 1240 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 n-R5s169-201ENSMUST00000083110 120 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Atg4aQ8C9S8 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Atg4aQ8C9S8 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Atg4aQ8C9S8 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Atg4aQ8C9S8 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Atg4aQ8C9S8 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Atg4aQ8C9S8 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Atg4aQ8C9S8 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Atg4aQ8C9S8 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Atg4aQ8C9S8 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm24519-201ENSMUST00000104507 132 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm7910-201ENSMUST00000117896 835 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 Gm6451-201ENSMUST00000121488 717 ntBASIC8.46□□□□□ -1.06
Atg4aQ8C9S8 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms