Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
Trim47Q8C0E3 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim47Q8C0E3 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm12838-201ENSMUST00000116278 325 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm12393-201ENSMUST00000117084 848 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm14584-201ENSMUST00000118956 637 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm15785-201ENSMUST00000119145 694 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm11259-201ENSMUST00000120554 715 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm12870-201ENSMUST00000121383 1016 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm12317-201ENSMUST00000122307 319 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Scarna17-201ENSMUST00000158064 79 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm26159-201ENSMUST00000158968 104 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm17038-201ENSMUST00000166586 494 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm26269-201ENSMUST00000180144 126 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm5839-201ENSMUST00000182835 1007 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm20811-201ENSMUST00000190500 553 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Ighv1-38-201ENSMUST00000192755 349 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm37920-201ENSMUST00000192952 749 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm37399-201ENSMUST00000195224 416 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm43008-201ENSMUST00000202346 286 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 AC163621.1-201ENSMUST00000220695 379 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 AC122533.2-201ENSMUST00000223772 545 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 AC163038.4-201ENSMUST00000224942 474 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 AC154461.5-201ENSMUST00000225429 774 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 AC137902.2-201ENSMUST00000227989 576 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 AC107452.2-201ENSMUST00000228415 363 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm16391-201ENSMUST00000086601 447 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm45534-201ENSMUST00000211449 2339 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Trim47Q8C0E3 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm44001-201ENSMUST00000203158 3773 ntBASIC8.83□□□□□ -1
Trim47Q8C0E3 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim47Q8C0E3 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 AC149294.7-201ENSMUST00000227475 1432 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 AC164437.4-204ENSMUST00000227169 4024 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm28791-201ENSMUST00000185888 1779 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm26429-201ENSMUST00000104829 110 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm2003-201ENSMUST00000118537 636 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC8.82□□□□□ -1
Trim47Q8C0E3 Fau-ps2-201ENSMUST00000119333 371 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm13252-201ENSMUST00000119355 321 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm14369-201ENSMUST00000121355 285 ntBASIC8.82□□□□□ -1
Trim47Q8C0E3 Gm12103-201ENSMUST00000121892 362 ntBASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms