Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Gm44090-201ENSMUST00000204669 1834 ntBASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Mir1960-201ENSMUST00000157488 78 ntBASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.76□□□□□ -1.49
Smg1Q8BKX6 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smg1Q8BKX6 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm21152-201ENSMUST00000190271 3483 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 D5Ertd579e-201ENSMUST00000031091 6677 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm14550-201ENSMUST00000117918 407 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm12262-201ENSMUST00000119915 305 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm25019-201ENSMUST00000179732 110 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm18995-201ENSMUST00000202981 520 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Retreg1-203ENSMUST00000226438 2783 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm11343-201ENSMUST00000120579 599 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 AC121997.2-202ENSMUST00000227158 939 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm24695-201ENSMUST00000083877 83 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm43254-201ENSMUST00000199187 2491 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm42898-201ENSMUST00000200370 3073 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm24230-201ENSMUST00000104313 129 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm19840-201ENSMUST00000169624 882 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm20778-201ENSMUST00000178524 627 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm22420-201ENSMUST00000178795 126 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm28017-201ENSMUST00000183434 126 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm44565-201ENSMUST00000208194 269 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Gm7802-201ENSMUST00000216464 262 ntBASIC5.75□□□□□ -1.49
Smg1Q8BKX6 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smg1Q8BKX6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Smg1Q8BKX6 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Smg1Q8BKX6 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.74□□□□□ -1.49
Smg1Q8BKX6 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Smg1Q8BKX6 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms