Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Zfp419-201ENSMUST00000173446 916 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm28115-201ENSMUST00000188985 360 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm37942-201ENSMUST00000191875 628 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm36976-201ENSMUST00000192632 1110 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm37119-201ENSMUST00000195691 389 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm2287-201ENSMUST00000197417 1084 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm17824-201ENSMUST00000197690 805 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm44987-201ENSMUST00000206578 750 ntTSL 3 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm45164-201ENSMUST00000207438 896 ntTSL 3 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm18455-201ENSMUST00000208768 459 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm18362-201ENSMUST00000221786 529 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 AC124569.1-201ENSMUST00000225932 101 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 AC117202.1-201ENSMUST00000227007 445 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 CT025533.1-201ENSMUST00000227485 706 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Tnp1-201ENSMUST00000027374 437 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Rhox12-201ENSMUST00000096453 920 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm43292-201ENSMUST00000199580 2449 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 AC126804.1-201ENSMUST00000216609 2079 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm11548-201ENSMUST00000140203 2199 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm28048-201ENSMUST00000160826 2746 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Foxc1Q61572 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Mmp27-202ENSMUST00000151853 1673 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Ipo11-202ENSMUST00000080856 4325 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Trim36-201ENSMUST00000037011 4544 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC6.51□□□□□ -1.37
Foxc1Q61572 D230017M19Rik-203ENSMUST00000181973 1649 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 2610028H24Rik-201ENSMUST00000092406 1640 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm29055-201ENSMUST00000186337 1710 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Efcab1-201ENSMUST00000090277 2494 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm12002-202ENSMUST00000153794 1803 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm24608-201ENSMUST00000104381 136 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm9599-201ENSMUST00000117473 481 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm6368-201ENSMUST00000119727 2147 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm12464-201ENSMUST00000121385 1016 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm12133-201ENSMUST00000121775 661 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm25808-201ENSMUST00000122784 284 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm11537-201ENSMUST00000124865 791 ntTSL 3 BASIC6.51□□□□□ -1.37
Foxc1Q61572 4930570D08Rik-201ENSMUST00000130431 196 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm14488-202ENSMUST00000134755 668 ntTSL 3 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm15179-202ENSMUST00000152799 671 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm25372-201ENSMUST00000158161 255 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm23824-201ENSMUST00000158741 276 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC6.51□□□□□ -1.37
Foxc1Q61572 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Cfap61-214ENSMUST00000167179 183 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm6633-201ENSMUST00000173851 270 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 H2-M10.5-ps1-201ENSMUST00000174378 939 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm20548-205ENSMUST00000174864 787 ntTSL 3 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm25598-201ENSMUST00000179031 107 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm5262-201ENSMUST00000180655 996 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm9568-201ENSMUST00000182514 1008 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm27483-201ENSMUST00000184983 71 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm17813-201ENSMUST00000185377 328 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm28865-201ENSMUST00000187685 723 ntTSL 3 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm17777-201ENSMUST00000189740 1276 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Gm37920-201ENSMUST00000192952 749 ntBASIC6.51□□□□□ -1.37
Foxc1Q61572 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms