Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC9.04□□□□□ -0.96
Rnf20Q5DTM8 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rnf20Q5DTM8 Gm44228-201ENSMUST00000204888 2026 ntBASIC9.04□□□□□ -0.96
Rnf20Q5DTM8 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm26967-201ENSMUST00000182878 2303 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm44178-201ENSMUST00000205229 2930 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm12599-201ENSMUST00000120534 792 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm16523-201ENSMUST00000121253 592 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm22562-201ENSMUST00000157334 111 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm24685-201ENSMUST00000157764 285 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm26371-201ENSMUST00000157829 104 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm23822-201ENSMUST00000158739 128 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm2959-201ENSMUST00000169844 621 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm8046-201ENSMUST00000172151 616 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm18356-201ENSMUST00000185677 623 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm8204-201ENSMUST00000185696 2144 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm37908-201ENSMUST00000195828 470 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm43245-201ENSMUST00000197603 468 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm19340-201ENSMUST00000221995 345 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 AL590616.1-201ENSMUST00000223339 574 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 AC158986.1-201ENSMUST00000228391 3455 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm18066-201ENSMUST00000210904 1774 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm9256-201ENSMUST00000198106 1420 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm38380-201ENSMUST00000195718 2248 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 Gm42678-201ENSMUST00000197163 2221 ntBASIC9.03□□□□□ -0.96
Rnf20Q5DTM8 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Rnf20Q5DTM8 BC085271-201ENSMUST00000191852 1487 ntBASIC9.02□□□□□ -0.96
Rnf20Q5DTM8 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Rnf20Q5DTM8 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Rnf20Q5DTM8 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.96
Rnf20Q5DTM8 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Rnf20Q5DTM8 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Rnf20Q5DTM8 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm45263-201ENSMUST00000210377 1375 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm12365-201ENSMUST00000117931 568 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm14375-201ENSMUST00000119490 855 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm14749-201ENSMUST00000121269 333 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm26424-201ENSMUST00000122530 104 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm22143-201ENSMUST00000157401 203 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm24530-201ENSMUST00000157948 288 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm23117-201ENSMUST00000158482 108 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm38164-201ENSMUST00000192810 330 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm37438-201ENSMUST00000192813 393 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm42424-201ENSMUST00000198319 376 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Gm44282-201ENSMUST00000203199 190 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 AC154239.2-201ENSMUST00000227859 233 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Desi2-202ENSMUST00000069568 1193 ntBASIC9.02□□□□□ -0.97
Rnf20Q5DTM8 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms