Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm8896-201ENSMUST00000197434 1106 ntBASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Gm42907-201ENSMUST00000199793 2148 ntBASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 AC132587.1-201ENSMUST00000220562 166 ntBASIC9.42□□□□□ -0.9
Usp48Q3V0C5 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp48Q3V0C5 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm12258-201ENSMUST00000093768 2524 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm24048-201ENSMUST00000102411 106 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm11485-201ENSMUST00000120048 1175 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm24050-201ENSMUST00000158623 290 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm6838-201ENSMUST00000172851 582 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm17911-201ENSMUST00000210806 877 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm45725-201ENSMUST00000212962 337 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 AC147101.1-201ENSMUST00000217964 312 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 AC126673.2-201ENSMUST00000221052 686 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm19238-201ENSMUST00000221936 1260 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 AC133958.1-201ENSMUST00000227085 961 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm23054-201ENSMUST00000082804 162 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm24613-201ENSMUST00000083266 130 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Gm18493-201ENSMUST00000192084 1612 ntBASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp48Q3V0C5 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm8569-201ENSMUST00000117630 647 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm12851-201ENSMUST00000117920 421 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm23888-201ENSMUST00000122690 253 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm26000-201ENSMUST00000157991 107 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm25432-201ENSMUST00000158284 66 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm24551-201ENSMUST00000158645 92 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Mir6908-201ENSMUST00000184056 63 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm28614-201ENSMUST00000186483 458 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm29464-201ENSMUST00000187692 513 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms