Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm12445-201ENSMUST00000117947 885 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm11343-201ENSMUST00000120579 599 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm26357-201ENSMUST00000158218 115 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm22262-201ENSMUST00000158713 86 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Mir6415-201ENSMUST00000184064 100 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm28428-201ENSMUST00000188886 697 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm29739-201ENSMUST00000191760 529 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.2□□□□□ -1.1
Hmgb1P63158 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Hmgb1P63158 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Hmgb1P63158 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm43229-201ENSMUST00000201812 1850 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 AC131586.2-202ENSMUST00000227016 2705 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 AC124516.1-201ENSMUST00000221845 3544 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Mir6403-201ENSMUST00000185007 129 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm18802-201ENSMUST00000186270 888 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm7436-201ENSMUST00000187229 391 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm38135-201ENSMUST00000195068 502 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm5717-201ENSMUST00000198243 1062 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm18207-201ENSMUST00000205486 526 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm19201-201ENSMUST00000210127 778 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC8.19□□□□□ -1.1
Hmgb1P63158 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC8.19□□□□□ -1.1
Hmgb1P63158 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.19□□□□□ -1.1
Hmgb1P63158 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC8.19□□□□□ -1.1
Hmgb1P63158 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Hmgb1P63158 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Hmgb1P63158 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.19□□□□□ -1.1
Hmgb1P63158 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 1915.4 ms