Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Rpl39P62892 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC4.88□□□□□ -1.63
Rpl39P62892 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Rpl39P62892 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm11833-201ENSMUST00000118393 853 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 Gm6061-201ENSMUST00000175860 492 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC4.88□□□□□ -1.63
Rpl39P62892 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC4.88□□□□□ -1.63
Rpl39P62892 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm18192-201ENSMUST00000210174 941 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC4.88□□□□□ -1.63
Rpl39P62892 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Rpl39P62892 AC134537.1-201ENSMUST00000219205 265 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 Gm5668-201ENSMUST00000220897 436 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC4.88□□□□□ -1.63
Rpl39P62892 CT009556.4-201ENSMUST00000227092 200 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 AC166822.1-201ENSMUST00000227667 636 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 AC154806.1-202ENSMUST00000227949 885 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 AC125117.2-201ENSMUST00000228344 1140 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Rpl39P62892 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Rpl39P62892 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm37940-201ENSMUST00000194243 3251 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm43502-201ENSMUST00000200263 2596 ntBASIC4.88□□□□□ -1.63
Rpl39P62892 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Rpl39P62892 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Rpl39P62892 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Rpl39P62892 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Rpl39P62892 AC162301.1-201ENSMUST00000228785 1542 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Rpl39P62892 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC4.87□□□□□ -1.63
Rpl39P62892 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Rpl39P62892 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
Rpl39P62892 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 AC103672.2-201ENSMUST00000228146 1687 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Rpl39P62892 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Rpl39P62892 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Gm11972-201ENSMUST00000118514 389 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Gm15712-201ENSMUST00000120369 1156 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Gm25842-201ENSMUST00000122590 322 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC4.87□□□□□ -1.63
Rpl39P62892 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC4.87□□□□□ -1.63
Rpl39P62892 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Gm14457-201ENSMUST00000148069 1161 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC4.87□□□□□ -1.63
Rpl39P62892 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Rpl39P62892 Gm25505-201ENSMUST00000157220 246 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Gm22949-201ENSMUST00000158562 105 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Gm16026-205ENSMUST00000162923 641 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Gm9149-201ENSMUST00000182724 1007 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC4.87□□□□□ -1.63
Rpl39P62892 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC4.87□□□□□ -1.63
Rpl39P62892 Gm36928-201ENSMUST00000192466 694 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Gm38306-201ENSMUST00000193954 237 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Gm37325-201ENSMUST00000194971 694 ntBASIC4.87□□□□□ -1.63
Rpl39P62892 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms