Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC154612.1-202ENSMUST00000224806 1725 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC10.78□□□□□ -0.68
Cux1P53564 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC10.78□□□□□ -0.68
Cux1P53564 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC10.78□□□□□ -0.68
Cux1P53564 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Cux1P53564 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Cux1P53564 Gm43410-201ENSMUST00000197510 2234 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Gm5512-202ENSMUST00000220222 1522 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC10.78□□□□□ -0.68
Cux1P53564 Gm24272-201ENSMUST00000102329 98 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Cux1P53564 Gm11271-201ENSMUST00000116054 440 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Gm13352-201ENSMUST00000117515 262 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Gm12135-201ENSMUST00000119170 466 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Gm13578-201ENSMUST00000120849 590 ntBASIC10.78□□□□□ -0.68
Cux1P53564 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Gm11107-201ENSMUST00000165414 505 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Gm9167-201ENSMUST00000182469 962 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Gm27348-201ENSMUST00000184511 170 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Gm44075-201ENSMUST00000204208 216 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC10.78□□□□□ -0.68
Cux1P53564 AC125064.1-201ENSMUST00000225801 295 ntBASIC10.78□□□□□ -0.68
Cux1P53564 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cux1P53564 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cux1P53564 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cux1P53564 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Cux1P53564 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cux1P53564 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Cux1P53564 Gm44916-201ENSMUST00000208664 2194 ntBASIC10.77□□□□□ -0.68
Cux1P53564 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cux1P53564 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cux1P53564 Gm44745-201ENSMUST00000206563 2723 ntBASIC10.77□□□□□ -0.69
Cux1P53564 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cux1P53564 Gm15765-201ENSMUST00000118407 910 ntBASIC10.77□□□□□ -0.69
Cux1P53564 Gm11902-201ENSMUST00000118849 270 ntBASIC10.77□□□□□ -0.69
Cux1P53564 Gm27299-201ENSMUST00000184593 103 ntBASIC10.77□□□□□ -0.69
Cux1P53564 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cux1P53564 Gm43689-201ENSMUST00000195951 427 ntBASIC10.77□□□□□ -0.69
Cux1P53564 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC10.77□□□□□ -0.69
Cux1P53564 Gm2602-201ENSMUST00000202112 571 ntBASIC10.77□□□□□ -0.69
Cux1P53564 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cux1P53564 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC10.77□□□□□ -0.69
Cux1P53564 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cux1P53564 Vmn1r41-202ENSMUST00000226337 888 ntBASIC10.77□□□□□ -0.69
Cux1P53564 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC10.77□□□□□ -0.69
Cux1P53564 Cma2-202ENSMUST00000228263 857 ntBASIC10.77□□□□□ -0.69
Cux1P53564 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cux1P53564 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cux1P53564 Gm38277-201ENSMUST00000195172 1367 ntBASIC10.77□□□□□ -0.69
Cux1P53564 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cux1P53564 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC10.77□□□□□ -0.69
Cux1P53564 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC10.77□□□□□ -0.69
Cux1P53564 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cux1P53564 Gm44121-201ENSMUST00000205169 2006 ntBASIC10.77□□□□□ -0.69
Cux1P53564 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC10.76□□□□□ -0.69
Cux1P53564 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cux1P53564 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cux1P53564 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cux1P53564 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cux1P53564 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cux1P53564 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC10.76□□□□□ -0.69
Cux1P53564 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cux1P53564 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cux1P53564 Gm13702-201ENSMUST00000118542 825 ntBASIC10.76□□□□□ -0.69
Cux1P53564 Gm13462-201ENSMUST00000121472 961 ntBASIC10.76□□□□□ -0.69
Cux1P53564 Gm13642-201ENSMUST00000121697 381 ntBASIC10.76□□□□□ -0.69
Cux1P53564 Gm11879-201ENSMUST00000121885 702 ntBASIC10.76□□□□□ -0.69
Cux1P53564 Gm12152-201ENSMUST00000122465 684 ntBASIC10.76□□□□□ -0.69
Cux1P53564 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC10.76□□□□□ -0.69
Cux1P53564 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cux1P53564 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC10.76□□□□□ -0.69
Cux1P53564 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cux1P53564 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC10.76□□□□□ -0.69
Cux1P53564 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC10.76□□□□□ -0.69
Cux1P53564 AL713985.1-201ENSMUST00000219030 420 ntBASIC10.76□□□□□ -0.69
Cux1P53564 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cux1P53564 Gm2139-201ENSMUST00000222569 1075 ntBASIC10.76□□□□□ -0.69
Cux1P53564 AC132260.1-201ENSMUST00000225499 734 ntBASIC10.76□□□□□ -0.69
Cux1P53564 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cux1P53564 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cux1P53564 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms