Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Sf3b3-201ENSMUST00000042012 4525 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
HttP42859 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HttP42859 Gm13821-201ENSMUST00000202029 3201 ntBASIC7.2□□□□□ -1.26
HttP42859 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
HttP42859 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
HttP42859 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC7.19□□□□□ -1.26
HttP42859 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Mir466f-4-201ENSMUST00000116930 121 ntBASIC7.19□□□□□ -1.26
HttP42859 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm20932-201ENSMUST00000189115 694 ntBASIC7.19□□□□□ -1.26
HttP42859 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm8058-201ENSMUST00000217247 587 ntBASIC7.19□□□□□ -1.26
HttP42859 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.19□□□□□ -1.26
HttP42859 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm25587-201ENSMUST00000082498 166 ntBASIC7.19□□□□□ -1.26
HttP42859 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm42692-201ENSMUST00000199482 2833 ntBASIC7.19□□□□□ -1.26
HttP42859 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
HttP42859 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.19□□□□□ -1.26
HttP42859 D5Ertd579e-201ENSMUST00000031091 6677 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
HttP42859 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.19□□□□□ -1.26
HttP42859 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
HttP42859 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
HttP42859 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Gm14388-201ENSMUST00000118119 477 ntBASIC7.19□□□□□ -1.26
HttP42859 Gm15709-201ENSMUST00000118354 213 ntBASIC7.19□□□□□ -1.26
HttP42859 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC7.19□□□□□ -1.26
HttP42859 Gm27152-201ENSMUST00000183828 99 ntBASIC7.19□□□□□ -1.26
HttP42859 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
HttP42859 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
HttP42859 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.19□□□□□ -1.26
HttP42859 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.19□□□□□ -1.26
HttP42859 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
HttP42859 Gm15732-201ENSMUST00000079794 480 ntBASIC7.19□□□□□ -1.26
HttP42859 Gm11885-201ENSMUST00000118473 1428 ntBASIC7.19□□□□□ -1.26
HttP42859 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
HttP42859 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
HttP42859 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HttP42859 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Gm25345-201ENSMUST00000104505 133 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm11105-201ENSMUST00000112781 478 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm14550-201ENSMUST00000117918 407 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm15763-201ENSMUST00000120136 403 ntBASIC7.18□□□□□ -1.26
HttP42859 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
HttP42859 Gm8323-201ENSMUST00000168436 1201 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm21772-201ENSMUST00000169213 478 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm17126-201ENSMUST00000172276 523 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm2877-201ENSMUST00000178248 1204 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm8324-201ENSMUST00000178911 1204 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm2871-201ENSMUST00000179984 1204 ntBASIC7.18□□□□□ -1.26
HttP42859 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Gm37196-201ENSMUST00000194762 906 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm5853-201ENSMUST00000197183 632 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm9202-201ENSMUST00000223036 437 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.18□□□□□ -1.26
HttP42859 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
HttP42859 Mir27a-201ENSMUST00000083510 87 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.18□□□□□ -1.26
HttP42859 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HttP42859 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC7.18□□□□□ -1.26
HttP42859 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC7.18□□□□□ -1.26
HttP42859 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC7.18□□□□□ -1.26
HttP42859 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Gm9923-201ENSMUST00000217785 1836 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.18□□□□□ -1.26
HttP42859 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Olfr1564-203ENSMUST00000213642 5271 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
HttP42859 Olfr1564-205ENSMUST00000215450 5281 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
HttP42859 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms