Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.64□□□□□ -1.35
Sox6P40645 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.64□□□□□ -1.35
Sox6P40645 Gm20274-201ENSMUST00000206967 584 ntBASIC6.64□□□□□ -1.35
Sox6P40645 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.64□□□□□ -1.35
Sox6P40645 Gm2089-201ENSMUST00000218294 479 ntBASIC6.64□□□□□ -1.35
Sox6P40645 Mif-ps7-201ENSMUST00000223357 327 ntBASIC6.64□□□□□ -1.35
Sox6P40645 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Sox6P40645 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Sox6P40645 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Sox6P40645 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Sox6P40645 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Sox6P40645 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sox6P40645 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sox6P40645 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sox6P40645 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
Sox6P40645 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sox6P40645 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
Sox6P40645 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.64□□□□□ -1.35
Sox6P40645 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.64□□□□□ -1.35
Sox6P40645 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
Sox6P40645 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.64□□□□□ -1.35
Sox6P40645 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox6P40645 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Sox6P40645 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sox6P40645 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Gm14480-201ENSMUST00000118521 433 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Gm13006-201ENSMUST00000118683 214 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Gm14584-201ENSMUST00000118956 637 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.63□□□□□ -1.35
Sox6P40645 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.63□□□□□ -1.35
Sox6P40645 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.63□□□□□ -1.35
Sox6P40645 Gm24647-201ENSMUST00000157112 113 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.63□□□□□ -1.35
Sox6P40645 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.63□□□□□ -1.35
Sox6P40645 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Gm37225-201ENSMUST00000193423 325 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Gm37724-201ENSMUST00000195240 1221 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.63□□□□□ -1.35
Sox6P40645 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Sox6P40645 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.63□□□□□ -1.35
Sox6P40645 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC6.63□□□□□ -1.35
Sox6P40645 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.63□□□□□ -1.35
Sox6P40645 AC154838.3-201ENSMUST00000228876 965 ntBASIC6.63□□□□□ -1.35
Sox6P40645 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sox6P40645 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
Sox6P40645 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
Sox6P40645 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox6P40645 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox6P40645 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.62□□□□□ -1.35
Sox6P40645 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox6P40645 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox6P40645 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.62□□□□□ -1.35
Sox6P40645 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.62□□□□□ -1.35
Sox6P40645 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox6P40645 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox6P40645 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms