Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Gm14896-201ENSMUST00000121311 1351 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm37595-201ENSMUST00000192668 1742 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Gm25785-201ENSMUST00000104129 125 ntBASIC8□□□□□ -1.13
Col2a1P28481 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Col2a1P28481 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Gm22990-201ENSMUST00000175427 89 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Gm18752-201ENSMUST00000192876 608 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm2229-201ENSMUST00000193328 710 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8□□□□□ -1.13
Col2a1P28481 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8□□□□□ -1.13
Col2a1P28481 Gm46203-201ENSMUST00000218130 478 ntBASIC8□□□□□ -1.13
Col2a1P28481 Olfr809-203ENSMUST00000218237 1100 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm7441-201ENSMUST00000220697 1074 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm7252-201ENSMUST00000223284 456 ntBASIC8□□□□□ -1.13
Col2a1P28481 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col2a1P28481 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
Col2a1P28481 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 AC156025.3-201ENSMUST00000225919 3095 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Col2a1P28481 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm38284-201ENSMUST00000194803 4539 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col2a1P28481 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col2a1P28481 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm12447-201ENSMUST00000119110 470 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Gm12135-201ENSMUST00000119170 466 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Gm8722-201ENSMUST00000121466 769 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm5456-201ENSMUST00000170706 844 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Gm24812-201ENSMUST00000175315 284 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Gm17045-201ENSMUST00000178600 844 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm28413-201ENSMUST00000189369 291 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm6077-201ENSMUST00000196008 499 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.99□□□□□ -1.13
Col2a1P28481 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm6575-201ENSMUST00000222946 697 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col2a1P28481 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Col2a1P28481 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.99□□□□□ -1.13
Col2a1P28481 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.99□□□□□ -1.13
Col2a1P28481 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col2a1P28481 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm37022-201ENSMUST00000192517 2254 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col2a1P28481 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.98□□□□□ -1.13
Col2a1P28481 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm38173-201ENSMUST00000193126 2314 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Col2a1P28481 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Col2a1P28481 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Col2a1P28481 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms