Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pde6aP27664 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Pde6aP27664 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pde6aP27664 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8.3□□□□□ -1.08
Pde6aP27664 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pde6aP27664 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pde6aP27664 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pde6aP27664 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Pde6aP27664 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pde6aP27664 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pde6aP27664 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pde6aP27664 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.3□□□□□ -1.08
Pde6aP27664 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.3□□□□□ -1.08
Pde6aP27664 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pde6aP27664 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.29□□□□□ -1.08
Pde6aP27664 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.29□□□□□ -1.08
Pde6aP27664 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pde6aP27664 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm12740-201ENSMUST00000118794 308 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Gm12372-201ENSMUST00000121654 768 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm24228-201ENSMUST00000158829 129 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Gm3344-201ENSMUST00000169610 603 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm18875-201ENSMUST00000188563 882 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Gm18699-201ENSMUST00000190713 243 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Gm37005-201ENSMUST00000193281 1164 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm19092-201ENSMUST00000209036 969 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Gm9604-201ENSMUST00000211175 433 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pde6aP27664 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.29□□□□□ -1.08
Pde6aP27664 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 AC096628.1-201ENSMUST00000226060 641 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm5528-201ENSMUST00000076314 480 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pde6aP27664 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pde6aP27664 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Gm43425-201ENSMUST00000201793 3291 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Pde6aP27664 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Pde6aP27664 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.29□□□□□ -1.08
Pde6aP27664 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 AC120347.1-201ENSMUST00000223326 1639 ntBASIC8.29□□□□□ -1.08
Pde6aP27664 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pde6aP27664 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pde6aP27664 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pde6aP27664 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pde6aP27664 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Pde6aP27664 Gm45885-202ENSMUST00000211520 1383 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pde6aP27664 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pde6aP27664 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pde6aP27664 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Pde6aP27664 Gm23527-201ENSMUST00000104570 130 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC8.28□□□□□ -1.08
Pde6aP27664 Gm14000-201ENSMUST00000118670 233 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pde6aP27664 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pde6aP27664 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Gm23018-201ENSMUST00000177928 109 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pde6aP27664 Gm29240-201ENSMUST00000187248 286 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Gm37349-201ENSMUST00000194205 624 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Gm24826-202ENSMUST00000197298 216 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Gm10297-201ENSMUST00000207136 651 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Pde6aP27664 AC122924.1-201ENSMUST00000222044 163 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.28□□□□□ -1.08
Pde6aP27664 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Pde6aP27664 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms