Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Lire1P11260 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Lire1P11260 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Lire1P11260 Gm27595-201ENSMUST00000184579 112 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Gm17867-201ENSMUST00000188981 391 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Gm5244-202ENSMUST00000189517 743 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Gm4545-201ENSMUST00000190797 603 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Gm17530-201ENSMUST00000194336 472 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Mir7230-201ENSMUST00000195977 56 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC7.02□□□□□ -1.29
Lire1P11260 Gm6522-201ENSMUST00000197160 1203 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Gm3103-201ENSMUST00000198073 752 ntBASIC7.02□□□□□ -1.29
Lire1P11260 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.02□□□□□ -1.29
Lire1P11260 Gm18226-201ENSMUST00000215261 521 ntBASIC7.02□□□□□ -1.29
Lire1P11260 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC7.02□□□□□ -1.29
Lire1P11260 AC162183.1-201ENSMUST00000224843 472 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Zfp874a-208ENSMUST00000225479 1092 ntBASIC7.02□□□□□ -1.29
Lire1P11260 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.02□□□□□ -1.29
Lire1P11260 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Lire1P11260 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Lire1P11260 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Lire1P11260 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Lire1P11260 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Lire1P11260 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
Lire1P11260 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Lire1P11260 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Lire1P11260 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.02□□□□□ -1.29
Lire1P11260 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Lire1P11260 Gm4973-201ENSMUST00000206925 1334 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Gm37775-201ENSMUST00000194120 2313 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.01□□□□□ -1.29
Lire1P11260 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.01□□□□□ -1.29
Lire1P11260 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Lire1P11260 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Lire1P11260 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Lire1P11260 Gm10936-201ENSMUST00000105264 252 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Gm12098-201ENSMUST00000118277 508 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Gm12517-201ENSMUST00000122082 425 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC7.01□□□□□ -1.29
Lire1P11260 Gm22424-201ENSMUST00000158527 87 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Gm17047-201ENSMUST00000167709 430 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Gm4781-201ENSMUST00000167995 781 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Gm27160-201ENSMUST00000184837 199 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Gm37729-201ENSMUST00000194761 1172 ntBASIC7.01□□□□□ -1.29
Lire1P11260 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.01□□□□□ -1.29
Lire1P11260 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC7.01□□□□□ -1.29
Lire1P11260 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC7.01□□□□□ -1.29
Lire1P11260 Gm44539-201ENSMUST00000206010 238 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC7.01□□□□□ -1.29
Lire1P11260 Gm3011-201ENSMUST00000215669 582 ntBASIC7.01□□□□□ -1.29
Lire1P11260 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.01□□□□□ -1.29
Lire1P11260 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.01□□□□□ -1.29
Lire1P11260 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.01□□□□□ -1.29
Lire1P11260 AC124103.1-201ENSMUST00000227564 1027 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Lire1P11260 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Lire1P11260 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Lire1P11260 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Lire1P11260 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Lire1P11260 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.01□□□□□ -1.29
Lire1P11260 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
Lire1P11260 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.01□□□□□ -1.29
Lire1P11260 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Lire1P11260 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Lire1P11260 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Lire1P11260 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
Lire1P11260 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Gm6640-201ENSMUST00000120629 1587 ntBASIC7□□□□□ -1.29
Lire1P11260 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Gm37483-201ENSMUST00000194382 1484 ntBASIC7□□□□□ -1.29
Lire1P11260 Gm37311-201ENSMUST00000195541 2024 ntBASIC7□□□□□ -1.29
Lire1P11260 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Lire1P11260 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms