Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm5656-201ENSMUST00000171020 1096 ntBASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm18848-201ENSMUST00000182069 792 ntBASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm42804-201ENSMUST00000199701 178 ntBASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm5723-201ENSMUST00000203096 432 ntBASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm43905-201ENSMUST00000204516 204 ntBASIC7.69□□□□□ -1.18
Chmp6P0C0A3 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm18860-201ENSMUST00000212029 764 ntBASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm7986-201ENSMUST00000221336 551 ntBASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp6P0C0A3 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 AC091783.1-201ENSMUST00000223614 1613 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm12944-201ENSMUST00000119262 463 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm14990-201ENSMUST00000122354 445 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm23945-201ENSMUST00000179609 92 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm8101-201ENSMUST00000192796 478 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm45782-201ENSMUST00000212670 366 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 AC164550.1-201ENSMUST00000217821 1066 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp6P0C0A3 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm23437-201ENSMUST00000104036 127 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm12321-201ENSMUST00000121485 804 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm22275-201ENSMUST00000122470 310 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm23077-201ENSMUST00000157854 116 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm16026-205ENSMUST00000162923 641 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm3208-201ENSMUST00000168281 427 ntBASIC7.67□□□□□ -1.18
Chmp6P0C0A3 Gm27684-201ENSMUST00000183778 80 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms