Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Mir680-1-201ENSMUST00000102257 109 ntBASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 n-R5s178-201ENSMUST00000104249 114 ntBASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Gm24383-201ENSMUST00000122691 333 ntBASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Gm8607-201ENSMUST00000221864 431 ntBASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm5793-201ENSMUST00000119393 630 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm8648-201ENSMUST00000122457 221 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm23426-201ENSMUST00000122483 318 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm20454-201ENSMUST00000172713 221 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm8192-201ENSMUST00000182196 958 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Mir7046-201ENSMUST00000183435 66 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Scgb2b33-201ENSMUST00000187413 334 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Ighv8-3-201ENSMUST00000194985 295 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm44571-201ENSMUST00000208092 533 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm32983-201ENSMUST00000208500 505 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm37783-201ENSMUST00000192025 1856 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm45807-201ENSMUST00000209142 2874 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm38299-201ENSMUST00000193214 3789 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm13642-201ENSMUST00000121697 381 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm43235-201ENSMUST00000200121 297 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm44565-201ENSMUST00000208194 269 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Gm45626-201ENSMUST00000210093 361 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 AC125064.1-201ENSMUST00000225801 295 ntBASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc180J3QNE4 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm42866-201ENSMUST00000195919 3304 ntBASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm37595-201ENSMUST00000192668 1742 ntBASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm14375-201ENSMUST00000119490 855 ntBASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm6077-201ENSMUST00000196008 499 ntBASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm9367-201ENSMUST00000205703 546 ntBASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm19340-201ENSMUST00000221995 345 ntBASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Vmn1r41-202ENSMUST00000226337 888 ntBASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc180J3QNE4 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Gm22223-201ENSMUST00000157360 125 ntBASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Gm25722-201ENSMUST00000157498 279 ntBASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Gm22262-201ENSMUST00000158713 86 ntBASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Gm10773-201ENSMUST00000218071 3935 ntBASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc180J3QNE4 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc180J3QNE4 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms