Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm12710-201ENSMUST00000119011 216 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm12459-201ENSMUST00000120659 356 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm15362-201ENSMUST00000121459 388 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm14212-201ENSMUST00000122023 826 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm22262-201ENSMUST00000158713 86 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm6428-201ENSMUST00000161062 345 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm18469-201ENSMUST00000208850 439 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm2089-201ENSMUST00000218294 479 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Klf5-202ENSMUST00000226784 2852 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim3Q9R1R2 Cmah-208ENSMUST00000224819 9482 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm11880-201ENSMUST00000117612 399 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm12601-201ENSMUST00000118994 846 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm27373-201ENSMUST00000184017 184 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm8524-201ENSMUST00000186232 379 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm44192-201ENSMUST00000204195 556 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm44760-201ENSMUST00000206375 1173 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim3Q9R1R2 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trim3Q9R1R2 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trim3Q9R1R2 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Trim3Q9R1R2 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trim3Q9R1R2 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Trim3Q9R1R2 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trim3Q9R1R2 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.71□□□□□ -1.33
Trim3Q9R1R2 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trim3Q9R1R2 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Trim3Q9R1R2 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 158.2 ms