Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm9652-201ENSMUST00000209345 163 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm15105-201ENSMUST00000117777 204 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm13545-201ENSMUST00000119044 482 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm11689-201ENSMUST00000120766 302 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm14612-201ENSMUST00000121522 881 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm6428-201ENSMUST00000161062 345 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm7244-201ENSMUST00000164658 455 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Mir6987-201ENSMUST00000184789 73 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm35108-201ENSMUST00000194321 699 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm33191-201ENSMUST00000195604 699 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm8539-201ENSMUST00000199822 501 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm5305-201ENSMUST00000204010 746 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm45782-201ENSMUST00000212670 366 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm19217-201ENSMUST00000218238 328 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm22504-201ENSMUST00000082963 139 ntBASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cdc40Q9DC48 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.65□□□□□ -1.35
Cdc40Q9DC48 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cdc40Q9DC48 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Cdc40Q9DC48 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cdc40Q9DC48 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Cdc40Q9DC48 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cdc40Q9DC48 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cdc40Q9DC48 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.65□□□□□ -1.35
Cdc40Q9DC48 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cdc40Q9DC48 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Cdc40Q9DC48 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cdc40Q9DC48 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
Cdc40Q9DC48 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm17170-201ENSMUST00000112785 316 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm12710-201ENSMUST00000119011 216 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms