Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm29573-201ENSMUST00000190291 919 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm29503-201ENSMUST00000191044 930 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm37578-201ENSMUST00000192256 1177 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm9729-201ENSMUST00000196364 265 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 AC152946.3-201ENSMUST00000219424 280 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Cinp-205ENSMUST00000221182 774 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm9472-201ENSMUST00000221625 526 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 AV026068-224ENSMUST00000224827 928 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 AC134577.2-201ENSMUST00000228541 715 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm43059-201ENSMUST00000202437 1388 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gm27013-202ENSMUST00000205067 1436 ntBASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 2310015K22Rik-201ENSMUST00000191452 1461 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim13Q9CYB0 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm8818-201ENSMUST00000110797 1047 ntBASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm16007-201ENSMUST00000117837 286 ntBASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm11357-201ENSMUST00000119758 954 ntBASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm15081-201ENSMUST00000119794 844 ntBASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm12206-201ENSMUST00000119795 601 ntBASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm8832-201ENSMUST00000119890 395 ntBASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm23317-201ENSMUST00000157999 129 ntBASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim13Q9CYB0 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms