Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm15739-201ENSMUST00000118049 872 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm8916-201ENSMUST00000119732 949 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm13735-201ENSMUST00000120217 670 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm11689-201ENSMUST00000120766 302 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm11263-201ENSMUST00000121853 749 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm8058-201ENSMUST00000217247 587 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm5791-201ENSMUST00000220840 489 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Gm45250-201ENSMUST00000209414 3592 ntBASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm25344-201ENSMUST00000104503 132 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm11880-201ENSMUST00000117612 399 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm13444-201ENSMUST00000119445 522 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm12844-201ENSMUST00000119463 582 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm25989-201ENSMUST00000158761 133 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm7244-201ENSMUST00000164658 455 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm5445-201ENSMUST00000180224 480 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Pea15b-201ENSMUST00000182806 387 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm29008-201ENSMUST00000189387 298 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm37225-201ENSMUST00000193423 325 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm44356-201ENSMUST00000196731 111 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm7419-201ENSMUST00000209962 925 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm9249-201ENSMUST00000221420 578 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm43872-201ENSMUST00000203218 2213 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Sec24c-202ENSMUST00000223751 4196 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Gm44509-201ENSMUST00000205400 1324 ntBASIC8□□□□□ -1.13
Smc1aQ9CU62 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Smc1aQ9CU62 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Smc1aQ9CU62 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.99□□□□□ -1.13
Smc1aQ9CU62 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms