Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.9□□□□□ -1.31
Cstf3Q99LI7 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm24541-201ENSMUST00000103871 96 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm22671-201ENSMUST00000104420 134 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm15203-201ENSMUST00000117668 455 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm13940-201ENSMUST00000121023 301 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm14251-201ENSMUST00000122133 279 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm2709-201ENSMUST00000142979 350 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm23740-201ENSMUST00000157385 100 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm4613-201ENSMUST00000165488 276 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm7707-201ENSMUST00000165950 1156 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm5181-201ENSMUST00000183140 971 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Mir7115-201ENSMUST00000184275 64 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm28145-201ENSMUST00000189742 380 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm44760-201ENSMUST00000206375 1173 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 AC157571.1-201ENSMUST00000222014 520 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 AL844586.1-201ENSMUST00000224297 1042 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 AC139569.1-201ENSMUST00000226080 614 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Mir484-201ENSMUST00000093566 67 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.89□□□□□ -1.31
Cstf3Q99LI7 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.88□□□□□ -1.31
Cstf3Q99LI7 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm12219-201ENSMUST00000119198 443 ntBASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm23657-201ENSMUST00000122623 294 ntBASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm7341-201ENSMUST00000192183 926 ntBASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm37328-201ENSMUST00000193191 640 ntBASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Trbv9-201ENSMUST00000194494 290 ntBASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.88□□□□□ -1.31
Cstf3Q99LI7 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm43905-201ENSMUST00000204516 204 ntBASIC6.88□□□□□ -1.31
Cstf3Q99LI7 Gm44943-201ENSMUST00000207254 300 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms