Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm24613-201ENSMUST00000083266 130 ntBASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup35Q8R4R6 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Nup35Q8R4R6 CT030185.1-201ENSMUST00000222940 2289 ntBASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Nup35Q8R4R6 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm37206-201ENSMUST00000195512 3069 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm9030-201ENSMUST00000218405 2410 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm9029-201ENSMUST00000219232 2410 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm15730-201ENSMUST00000121828 415 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm4835-201ENSMUST00000155839 972 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm9149-201ENSMUST00000182724 1007 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm8304-201ENSMUST00000185744 584 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm38306-201ENSMUST00000193954 237 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm42734-201ENSMUST00000201656 878 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm43275-201ENSMUST00000202053 1020 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm7151-201ENSMUST00000211511 954 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 AC161374.1-201ENSMUST00000224191 794 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 AC163638.1-201ENSMUST00000224818 392 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 AC158981.1-201ENSMUST00000226943 1205 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 AC166822.1-201ENSMUST00000227667 636 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm7731-201ENSMUST00000091759 470 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.66□□□□□ -1.5
Nup35Q8R4R6 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Mir678-201ENSMUST00000102114 84 ntBASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm23701-201ENSMUST00000103893 110 ntBASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm12740-201ENSMUST00000118794 308 ntBASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm14457-201ENSMUST00000148069 1161 ntBASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm16026-205ENSMUST00000162923 641 ntBASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm18033-201ENSMUST00000186678 550 ntBASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm4545-201ENSMUST00000190797 603 ntBASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup35Q8R4R6 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms