Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm5611-201ENSMUST00000164523 852 ntBASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm38030-201ENSMUST00000192376 475 ntBASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm17965-201ENSMUST00000193904 517 ntBASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.39□□□□□ -1.07
Vps53Q8CCB4 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm6264-201ENSMUST00000160802 624 ntBASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Mir7669-201ENSMUST00000183442 58 ntBASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm5708-201ENSMUST00000196289 886 ntBASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm46379-201ENSMUST00000222551 265 ntBASIC8.38□□□□□ -1.07
Vps53Q8CCB4 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 CT009711.2-202ENSMUST00000224538 973 ntBASIC8.38□□□□□ -1.07
Vps53Q8CCB4 CT009527.2-201ENSMUST00000225386 606 ntBASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 AC158605.3-201ENSMUST00000218999 2538 ntBASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps53Q8CCB4 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm20775-201ENSMUST00000100115 1851 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm25760-201ENSMUST00000103989 132 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm15105-201ENSMUST00000117777 204 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm37225-201ENSMUST00000193423 325 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm8539-201ENSMUST00000199822 501 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm45725-201ENSMUST00000212962 337 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 AC154646.1-201ENSMUST00000225011 1092 ntBASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Vps53Q8CCB4 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms