Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm22707-201ENSMUST00000103834 110 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm13196-201ENSMUST00000118297 379 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm13486-201ENSMUST00000119910 282 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm29369-201ENSMUST00000190674 615 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm38217-201ENSMUST00000194358 910 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm46231-201ENSMUST00000220152 314 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm9315-201ENSMUST00000222696 908 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm26130-201ENSMUST00000083171 138 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Trim9Q8C7M3 AC129208.1-201ENSMUST00000227474 2906 ntBASIC7.79□□□□□ -1.16
Trim9Q8C7M3 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm25757-201ENSMUST00000103986 123 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm23437-201ENSMUST00000104036 127 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm24284-201ENSMUST00000104240 142 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm7910-201ENSMUST00000117896 835 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm14776-201ENSMUST00000121029 887 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm8192-201ENSMUST00000182196 958 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm44979-201ENSMUST00000206218 287 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm18860-201ENSMUST00000212029 764 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm46424-201ENSMUST00000221567 168 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Gm10259-201ENSMUST00000091289 1590 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim9Q8C7M3 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms